Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901231.1_cds_XP_016451254.1_45625
CDS Infomation

[gene=LOC107775961] [db_xref=GeneID:107775961] [protein=probable polyamine oxidase 2] [protein_id=XP_016451254.1] [location=join(12820..12859,14253..14368,14476..14564,14665..14778,14976..15063,15225..15310,15416..15518,15666..15763,15865..16294,16818..17120)] [gbkey=CDS]
Sequence

ATGGATTCTCAAAACAAGAGTAGTCGTCAGCTCCAAAGAGCTCCTTGCTTCTCAAATGTT
GGACGGAGGTATGTGGCTTCGCCATCTGTTATTGTAATAGGTGGTGGGATGGCAGGACTT
GCAGCTGCTCGTACTCTTCATGATGAATCATTTCAGGTTGTTGTGTTAGAATCACGAGAT
AGAATTGGAGGCCGAGTTCACACTGATTACTCTTTTGGTTTTCCTGTTGACTTGGGTGCA
TCATGGTTGCATGGCGTCTGCAAAGAGAATCCTTTGGCACCTCTTATTGGAAAACTAGGA
TTGCCTCTCTATCGTACAAGTGGTGACAATTCAGTTCTTTACGACCATGATCTGGAAAGT
TATGGGCTTTTTGACATGGATGGAAATCAAGTTTGTCAGGAATTAGTTGCAAAGGTTGGC
GAGACATTTGAGAGCATTTTGAAGGAGACTGATCAAATTAGGCAAGAATCCAGTGAAGAC
ATGTCTATCAGTCGTGCTATATCAATGGTTTTCGAAAGGAGACCTGATTTAAGGTTGAGT
GGCCTTGCTCATAAGGTGTTGCAGTGGTACCTATGCAGAATGGAAGGCTGGTTTGCCGCA
GATGCAGATACCATATCACTCAAGTGTTGGGACCAGGAAGAATTGCTTCCTGGTGGGCAT
GGTCTTATGGTCCGGGGATATAAGCCAGTCATTAATACACTAGCAAAAGGGCTTGACATT
CGGTTAGGTCACAGGGTTACAGAAGTTGTTAGACGTTATAATGGTGTGAAGGTAACAGTT
GAGGATGGGAGTTCTTTTGTAGCCGATGCTGCCATTATTGCTGTTCCTCTTGGTGTTCTG
AAATCAAATTGCATCAGGTTTGAACCAAGATTACCTGAATGGAAAGAGGCCGCCATTAAA
GAACTTGGTGTAGGAATTGAGAACAAGATTATTTTGCACTTTCAAGACGTCTTCTGGCCA
AATGTTGAGTTCTTGGGAGTAGTTGCAGAAAGCTCATATGAGTGCAGTTACTTTCTTAAT
CTTCACAAAGCTACTGGCCATCCTGTCCTTGTTTATATGCCTGCTGGACAACTGGCCCGC
GATATCGGGGAACTGTCAGATGAGGCTGCTGCTAATTTTGCATTTAAGCAACTTAAGAGG
ATCCTTCCTGATGCGACTGCTCCTATTCAGTATCTTGTTTCTCATTGGGGAACAGACATA
AACTCACTGGGATCATATAGCTATGATACAGTTGGGAAGCCCCATGATCTATATGAAAGG
CTGAGAGTACCAGTAGATAACCTATTCTTTGCTGGGGAGGCAACGAGTACGGATTACCCA
GGTTCTGTACATGGTGCATATTCAACTGGATTGCTGGCTGCTGAGGACTGCAGGATGCGT
GTCCTGGAGCGACATGGAGAGTTGGATATTTTCGAGCCAGTCATGGGTGAGGAAACACTT
ATTCCCATTTTGATTTCCAGATTGTAA

Peptide Sequence

PEP ID

XP_016451254.1
PEP Infomation

PREDICTED: probable polyamine oxidase 2 [Nicotiana tabacum]
Sequence

MDSQNKSSRQLQRAPCFSNVGRRYVASPSVIVIGGGMAGLAAARTLHDESFQVVVLESRD
RIGGRVHTDYSFGFPVDLGASWLHGVCKENPLAPLIGKLGLPLYRTSGDNSVLYDHDLES
YGLFDMDGNQVCQELVAKVGETFESILKETDQIRQESSEDMSISRAISMVFERRPDLRLS
GLAHKVLQWYLCRMEGWFAADADTISLKCWDQEELLPGGHGLMVRGYKPVINTLAKGLDI
RLGHRVTEVVRRYNGVKVTVEDGSSFVADAAIIAVPLGVLKSNCIRFEPRLPEWKEAAIK
ELGVGIENKIILHFQDVFWPNVEFLGVVAESSYECSYFLNLHKATGHPVLVYMPAGQLAR
DIGELSDEAAANFAFKQLKRILPDATAPIQYLVSHWGTDINSLGSYSYDTVGKPHDLYER
LRVPVDNLFFAGEATSTDYPGSVHGAYSTGLLAAEDCRMRVLERHGELDIFEPVMGEETL
IPILISRL

Transcript Sequence

Gene sequence data has not been registered.